No wonder that you mostly notice it on piano, it is the most sensitive instrument to W&F. Personally I hear it when the value reaches 0.1%, but the threshold varies from person to person. The usual suspects are the condition of the pinch roller, the pressure of the pinch roller (it has to be 1.3 kg +/- 100 g, and experience taught me that this is critical), the clealiness of the capstan (any crud on it?). It may also be caused by dragging brakes (sometimes the brakes remain very slightly engaged during play), or (quite often) by decaying tape tape, especially (but not only) if it sheds oxide on the tape transport, so you should make your tests with fresh tape.As a general rule, check that the whole tape transport is free from crud and debris before and after every tape when you make tests.
Since you said that you are refurbishing your machine, I assume that you have lubricated the capstan motor shaft with PDP65. If not, that may possibly be a cause to

ne other idea is that maybe it a shim is missing on the input tape guide (or output, if the stationary output guide has been replaced by a ball bearing), so that the tape gets pinched and resists traction enough to cause irregular speed - I have seen it happen on occasions. Also, make sure that the spring-loaded guide pin located on the left of the heads moves freely: if jammed it might cause speed fluctuations when the tape reaches the end (case seen on the pneumatically damped guide pin of a PR99)..