As long as it is connected either way, I don't see it being much of a difference. I know from a few threads here and there that some have actually lifted the grounds in different places and found the hum reduced. In my setup, my interconnects are directional, where the grounding shield is attached only on one end of the interconnect, and the setup is dead quiet. Not saying that is the problem, but, that single-ended connecting of the shielding can help with ground loops to an extent.
With a low-output cart, though, you're "magnifying" a lot more through that much gain, so the hum you may not hear with a high-output cartridge might be manifesting itself once you add all that gain (through preamp and SUTs). Sometimes repositioning components helps with the hum.
The Rogue is known to be a quiet component, so, unless there was a bad tube in there, it shouldn't be the problem. But placement, interconnects, grounding, etc. can be an issue. It'll just take a little hunting to find it.