Looks can be deceiving.
They are designed completely differently. The CS-99 is a ported speaker system; the CS-99A is called an 'infinite baffle' speaker system by Pioneer (it is a tightly sealed cabinet).
They are both rather more efficient than not (the 99A was spec'd at 97dB/w/m).
When I had the CS-99A, the first receiver I had was the SX-828, with a gutsy-sweet 54 wpc. I had no problem getting clean, deep bass from the 99A. Later, I got the JR-S501, a big 120 wpc receiver. Even bigger and tighter bass (hey, the mids and highs were always right on). They sounded great with the Carver The Receiver, too. For a good part of the time I had the 99A, I also had a pair of the CS-88A, and I ran both pair together.
One other thing: the CS-88A seemed to be made of solid walnut.
I bought them from a buddy after he came back to the world.