First do not remove the R/C network. The clue here is the fact that the RC network was blown. This means this amp was oscillating probably above 20khz and since the board has been changed that leaves only the inputs and outputs as culprits. I've never seen it, but the tech manual mentions that pinched insulators can cause oscillations.
Did you reuse insulators? Check the sockets. Make sure that all of the sockets are seated properly in the heatsink. Make sure the outputs and drivers are in properly and you can see the pins in the sockets. FWIW I never pull all of the outputs and drivers out at the same time because of the possibility of the sockets getting misaligned. Try swapping out the drivers and outputs. I would replace them one at a time. this is a last resort.
The input coupling cap shouldn't matter. all the switch does is short it out.
If you need insulators let me know. I picked up about 50,000 silpads (literally) last year at a surplus shop. At the same time I also got about a 1000 kapton TO3's.
I'm guessing you don't have a scope. That would give us some clues.